26 calls to chado_update_record()
- chado_analysis_update in legacy/
tripal_analysis/ includes/ tripal_analysis.chado_node.inc - Implements hook_update(). Update analyses
- chado_contact_update in legacy/
tripal_contact/ includes/ tripal_contact.chado_node.inc - Implements hook_update
- chado_featuremap_update in legacy/
tripal_featuremap/ includes/ tripal_featuremap.chado_node.inc - Implements hook_update(). Update nodes
- chado_feature_update in legacy/
tripal_feature/ includes/ tripal_feature.chado_node.inc - Implements hook_update().
- chado_insert_cv in tripal_chado/
api/ modules/ tripal_chado.cv.api.inc - Adds a controlled vocabulary to the CV table of Chado.
- chado_insert_cvterm in tripal_chado/
api/ modules/ tripal_chado.cv.api.inc - Add's a controlled vocabulary term to Chado.
- chado_insert_db in tripal_chado/
api/ modules/ tripal_chado.db.api.inc - Adds a new database to the Chado DB table and returns the DB object.
- chado_library_update in legacy/
tripal_library/ includes/ tripal_library.chado_node.inc - Implements hook_update().
- chado_organism_update in legacy/
tripal_organism/ includes/ tripal_organism.chado_node.inc - Implements hook_update().
- chado_project_update in legacy/
tripal_project/ includes/ tripal_project.chado_node.inc - Implements hook_update().
- chado_pub_update in legacy/
tripal_pub/ includes/ tripal_pub.chado_node.inc - Implements hook_update().
- chado_stock_update in legacy/
tripal_stock/ includes/ tripal_stock.chado_node.inc - Implements hook_update(). Handles Editing/Updating of main stock info
- chado_update_phylotree in tripal_chado/
api/ modules/ tripal_chado.phylotree.api.inc - Updates a phylotree record into Chado.
- chado_update_property in tripal_chado/
api/ tripal_chado.property.api.inc - Update a property for a given base table record and property name.
- FASTAImporter::loadFastaFeature in tripal_chado/
includes/ TripalImporter/ FASTAImporter.inc - A helper function for loadFasta() to load a single feature
- GFF3Importer::loadFasta in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load the FASTA sequences at the bottom of a GFF3 file
- GFF3Importer::loadFeature in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Create the feature record & link it to it's analysis
- GFF3Importer::loadFeatureLoc in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Insert the location of the feature
- GFF3Importer::loadGFF3 in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Actually load a GFF3 file. This is the function called by tripal jobs
- process_data_array_for_line in tripal_bulk_loader/
includes/ tripal_bulk_loader.loader.inc - Process the data array for a given line
- TaxonomyImporter::importRecord in tripal_chado/
includes/ TripalImporter/ TaxonomyImporter.inc - Imports an organism from the NCBI taxonomy DB by its taxonomy ID
- tripal_chado_db_edit_form_submit in tripal_chado/
includes/ tripal_chado.db.inc - Submit for edit db form
- tripal_chado_field_storage_write_table in tripal_chado/
includes/ tripal_chado.field_storage.inc - Write (inserts/updates/deletes) values for a Chado table.
- tripal_core_chado_update in legacy/
tripal_core/ api/ tripal_core.DEPRECATED.inc - tripal_cv_cv_edit_form_submit in tripal_chado/
includes/ tripal_chado.cv.inc - Submit cv edit form
- tripal_pub_add_publication in tripal_chado/
includes/ loaders/ tripal_chado.pub_importers.inc - Adds a new publication to the Chado, along with all properties and database cross-references. If the publication does not already exist in Chado then it is added. If it does exist nothing is done. If the $update parameter is TRUE then the…