tripal_chado.publish.inc
File
tripal_chado/includes/tripal_chado.publish.incView source
- <?php
-
- function tripal_chado_publish_form($form, &$form_state) {
-
- $langcode = 'und';
-
- $bundle_name = '';
- if (array_key_exists('values', $form_state)) {
- $bundle_name = $form_state['values']['bundle_name'];
- }
-
- // Build the list of available TripalEntity content types.
- $bundles = db_select('tripal_bundle', 'tb')
- ->fields('tb')
- ->orderBy('label', 'ASC')
- ->execute();
- $bundle_ids = array();
- $bundle_ids[] = 'Select a Content Type';
- while ($bundle = $bundles->fetchObject()) {
- $bundle_ids[$bundle->name] = $bundle->label;
- }
-
- $form['bundle_name'] = array(
- '#type' => 'select',
- '#title' => 'Content Type',
- '#description' => t('Select a content type to publish. Only data that
- is mapped to the selected vocabulary term will be published.'),
- '#options' => $bundle_ids,
- '#default_value' => $bundle_name,
- '#ajax' => array(
- 'callback' => "tripal_chado_publish_form_ajax_callback",
- 'wrapper' => "tripal-chado-publish-form",
- 'effect' => 'fade',
- 'method' => 'replace'
- ),
- );
-
- // If the user has selected a content type, then we need to
- // show some filters.
- if ($bundle_name) {
- $form['filters'] = array(
- '#type' => 'fieldset',
- '#title' => 'Filters',
- '#description' => t('Please provide any filters for limiting
- the records. Only those that match the filters specified
- below will be published. To publish all records of this
- type, leave all filters blank.'),
- '#collapsed' => TRUE,
- '#collapsible' => TRUE,
- );
-
- // Get the list of fields and their widgets
- $fields = field_info_field_map();
- foreach ($fields as $field_name => $details) {
- if (array_key_exists('TripalEntity', $details['bundles']) and
- in_array($bundle_name, $details['bundles']['TripalEntity'])) {
- $field = field_info_field($field_name);
- $instance = field_info_instance('TripalEntity', $field_name, $bundle_name);
-
- // Get the Chado mapping information.
- $base_table = array_key_exists('base_table', $instance['settings']) ? $instance['settings']['base_table'] : '';
- $chado_table = array_key_exists('chado_table', $instance['settings']) ? $instance['settings']['chado_table'] : '';
- $chado_field = array_key_exists('chado_field', $instance['settings']) ? $instance['settings']['chado_field'] : '';
-
- // For now, only handle filtering by fields that are mapped directly
- // to the base table.
- if (!$base_table or $base_table != $chado_table) {
- continue;
- }
-
- // Create a default element for this field. This code
- // is adapted from the field_multiple-value_form() function.
- $title = check_plain($instance['label']);
- $description = field_filter_xss($instance['description']);
- $parents = array_key_exists('#parents', $form) ? $form['#parents'] : '';
- $multiple = $field['cardinality'] > 1 || $field['cardinality'] == FIELD_CARDINALITY_UNLIMITED;
- $element = array(
- '#entity_type' => $instance['entity_type'],
- '#entity' => NULL,
- '#bundle' => $instance['bundle'],
- '#field_name' => $field_name,
- '#language' => $langcode,
- '#field_parents' => $parents,
- '#columns' => array_keys($field['columns']),
- '#title' => $title,
- '#description' => $description,
- '#required' => FALSE,
- '#delta' => 0,
- );
-
- // Now call the widget callback function to let the module adjust the
- // element as needed.
- $function = $instance['widget']['module'] . '_field_widget_form';
- $items = array();
- $delta = 0;
- $element = $function($form, $form_state, $field, $instance, $langcode, $items, $delta, $element);
-
- // None of these fields are required, so turn off that setting.
- $element['#required'] = FALSE;
-
- $form['filters'][$field_name] = array(
- '#type' => 'container',
- '#attributes' => array(
- 'class' => array(
- 'field-type-' . drupal_html_class($field['type']),
- 'field-name-' . drupal_html_class($field_name),
- 'field-widget-' . drupal_html_class($instance['widget']['type']),
- ),
- ),
- '#weight' => $instance['widget']['weight'],
- '#tree' => TRUE,
- $langcode => array(
- 0 => $element
- )
- );
- }
- }
- $form['publish_btn'] = array(
- '#type' => 'submit',
- '#name' => 'publish_btn',
- '#value' => 'Publish',
- );
- }
-
- $form['#prefix'] = '<div id="tripal-chado-publish-form">';
- $form['#suffix'] = '</div>';
- return $form;
- }
-
- /**
- * Validate handler for the tripal_chado_publish_form form.
- */
- function tripal_chado_publish_form_validate($form, &$form_state) {
-
- }
-
- /**
- * Submit handler for the tripal_chado_publish_form form.
- */
- function tripal_chado_publish_form_submit($form, &$form_state) {
- if ($form_state['clicked_button']['#name'] == 'publish_btn') {
- global $user;
-
- $langcode = 'und';
-
- $bundle_name = $form_state['values']['bundle_name'];
- $bundle = tripal_load_bundle_entity(array('name' => $bundle_name));
-
- // Iterate through any filters and add those to the arguments
- $filters = array();
- $fields = field_info_field_map();
- foreach ($fields as $field_name => $details) {
- if (array_key_exists('TripalEntity', $details['bundles']) and
- in_array($bundle_name, $details['bundles']['TripalEntity']) and
- array_key_exists($field_name, $form_state['values']) and
- array_key_exists('value', $form_state['values'][$field_name][$langcode][0])) {
- $value = $form_state['values'][$field_name][$langcode][0]['value'];
- if ($value) {
- $filters[$field_name] = $value;
- }
- }
- }
- $args = array(
- array(
- 'bundle_name' => $bundle_name,
- 'filters' => $filters,
- ),
- );
- $includes = array(
- module_load_include('inc', 'tripal_chado', 'includes/tripal_chado.publish'),
- );
- return tripal_add_job("Publish " . $bundle->label . " records.",
- 'tripal_chado', 'chado_publish_records', $args,
- $user->uid, 10, $includes);
- }
- }
- /**
- *
- */
- function tripal_chado_publish_form_ajax_callback($form, $form_state) {
- return $form;
- }
-