14 calls to tripal_set_job_progress()
- chado_cleanup_orphaned_nodes_part in tripal_core/
api/ tripal_core.chado_nodes.api.inc - This function will delete Drupal nodes for any sync'ed table (e.g. feature, organism, analysis, stock, library) if the chado record has been deleted or the entry in the chado_[table] table has been removed.
- chado_node_sync_records in tripal_core/
api/ tripal_core.chado_nodes.api.inc - Generic function for syncing records in Chado with Drupal nodes.
- chado_update_existing_node_urls in tripal_core/
api/ tripal_core.chado_nodes.title_and_path.api.inc - Tripal Job for updating all node URLs for a particular node type.
- tripal_analysis_set_feature_permission in tripal_analysis/
includes/ tripal_analysis_privacy.inc - Set permissions for features associated with an analysis @todo Stephen: ensure the $nid param is defined correctly
- tripal_bulk_loader_load_data in tripal_bulk_loader/
includes/ tripal_bulk_loader.loader.inc - Tripal Bulk Loader
- tripal_bulk_loader_progess_file_get_progress in tripal_bulk_loader/
tripal_bulk_loader.module - Get the progress of the current constant set from the progress file
- tripal_cv_obo_load_typedefs in tripal_cv/
includes/ tripal_cv.obo_loader.inc - OBO files are divided into a typedefs terms section and vocabulary terms section. This function loads the typedef terms from the OBO.
- tripal_cv_obo_parse in tripal_cv/
includes/ tripal_cv.obo_loader.inc - Parse the OBO file and populate the templ loading table
- tripal_cv_obo_process_terms in tripal_cv/
includes/ tripal_cv.obo_loader.inc - OBO files are divided into a typedefs section and a terms section. This function loads the typedef terms from the OBO.
- tripal_execute_pub_importer in tripal_pub/
includes/ tripal_pub.pub_importers.inc - Imports all publications for a given publication import setup.
- tripal_feature_load_fasta in tripal_feature/
includes/ tripal_feature.fasta_loader.inc - Actually load a fasta file. This is the function called by tripal jobs
- tripal_feature_load_gff3 in tripal_feature/
includes/ tripal_feature.gff_loader.inc - Actually load a GFF3 file. This is the function called by tripal jobs
- tripal_feature_load_gff3_fasta in tripal_feature/
includes/ tripal_feature.gff_loader.inc - Load the FASTA sequences at the bottom of a GFF3 file
- tripal_job_set_progress in tripal_core/
api/ tripal_core.DEPRECATED.api.inc