184 uses of TRIPAL_NOTICE
- chado_add_node_form_properties in tripal_core/
api/ tripal_core.chado_nodes.properties.api.inc - chado_does_pub_exist in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - chado_expand_var in tripal_core/
api/ tripal_core.chado_variables.api.inc - Retrieves fields, or tables that were excluded by default from a variable.
- chado_get_id_for_node in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_get_node_id in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_get_publication in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - chado_node_additional_dbxrefs_form in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_additional_dbxrefs_form_retreive in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_additional_dbxrefs_form_update_dbxrefs in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_properties_form in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_properties_form_retreive in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_properties_form_update_properties in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_relationships_form in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_relationships_form_retreive in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_node_relationships_form_update_relationships in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - chado_reimport_publications in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - get_max_chado_rank in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - process_data_array_for_line in tripal_bulk_loader/
includes/ tripal_bulk_loader.loader.inc - Process the data array for a given line
- pub_search in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_analysis_delete_property in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_analysis_get_node in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_analysis_get_property in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_analysis_insert_property in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_analysis_register_child in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_analysis_unregister_child in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_analysis_update_property in tripal_analysis/
api/ tripal_analysis.DEPRECATED.inc - tripal_bulk_loader_delete_field in tripal_bulk_loader/
api/ tripal_bulk_loader.DEPRECATED.inc - tripal_bulk_loader_delete_record in tripal_bulk_loader/
api/ tripal_bulk_loader.DEPRECATED.inc - tripal_bulk_loader_is_record_name_unique in tripal_bulk_loader/
api/ tripal_bulk_loader.DEPRECATED.inc - tripal_bulk_loader_load_data in tripal_bulk_loader/
includes/ tripal_bulk_loader.loader.inc - Tripal Bulk Loader
- tripal_bulk_loader_throw_error in tripal_bulk_loader/
includes/ tripal_bulk_loader.loader.inc - Used to throw a hopefully human-readable error.
- tripal_contact_add_contact in tripal_contact/
api/ tripal_contact.DEPRECATED.inc - tripal_contact_delete_property in tripal_contact/
api/ tripal_contact.DEPRECATED.inc - tripal_contact_get_property in tripal_contact/
api/ tripal_contact.DEPRECATED.inc - tripal_contact_insert_property in tripal_contact/
api/ tripal_contact.DEPRECATED.inc - tripal_contact_update_property in tripal_contact/
api/ tripal_contact.DEPRECATED.inc - tripal_core_chado_delete in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_get_foreign_key in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_insert in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_node_cleanup_orphaned in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_node_sync_form in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_node_sync_records in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_schema_exists in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_select in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_chado_update in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_create_custom_table in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_delete_property in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_delete_property_by_id in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_edit_custom_table in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_expand_chado_vars in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_generate_chado_var in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_get_chado_tables in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_get_chado_table_schema in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_get_chado_version in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_get_property in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_get_token_value_for_property in tripal_core/
includes/ tripal_core.search.inc - Retrieve values for all tokens for an entity property getter function.
- tripal_core_insert_property in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_is_chado_installed in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_is_chado_local in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_report_error in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - @todo Remove. This was not in Tripal 1.x.
- tripal_core_schema_exists in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_update_property in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_core_update_property_by_id in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_create_moddir in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_create_mod_subdir in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_custom_tables_get_table_id in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_cv_add_cv in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_add_cvterm in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_add_obo_ref in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_admin_set_defaults_form in tripal_cv/
includes/ tripal_cv.admin.inc - tripal_cv_cvterm_name_autocomplete in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cv in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cvterm_by_id in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cvterm_by_name in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cvterm_by_synonym in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cvterm_options in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cv_by_id in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cv_by_name in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cv_id in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_get_cv_options in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_submit_obo_job in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_cv_update_cvtermpath in tripal_cv/
api/ tripal_cv.DEPRECATED.inc - tripal_db_add_db in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_add_dbxref in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_add_dbxref_link in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_get_db in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_get_dbxref in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_get_dbxref_by_accession in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_get_db_by_db_id in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_get_db_by_name in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_get_db_options in tripal_db/
api/ tripal_db.DEPRECATED.inc - tripal_db_set_active in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_featuremap_add_featuremap_dbxref in tripal_featuremap/
api/ tripal_featuremap.DEPRECATED.inc - tripal_featuremap_delete_property in tripal_featuremap/
api/ tripal_featuremap.DEPRECATED.inc - tripal_featuremap_get_property in tripal_featuremap/
api/ tripal_featuremap.DEPRECATED.inc - tripal_featuremap_insert_property in tripal_featuremap/
api/ tripal_featuremap.DEPRECATED.inc - tripal_featuremap_update_property in tripal_featuremap/
api/ tripal_featuremap.DEPRECATED.inc - tripal_feature_add_cvterm in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_add_dbxref in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_analysis_delete_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_analysis_delete_property_by_id in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_analysis_get_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_analysis_insert_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_analysis_update_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_analysis_update_property_by_id in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_delete_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_delete_property_by_id in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_get_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_insert_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_reverse_complement in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_seq_extract_form in tripal_feature/
includes/ tripal_feature.seq_extract.inc - Form to choose which features to extract sequence for
- tripal_feature_update_property in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_feature_update_property_by_id in tripal_feature/
api/ tripal_feature.DEPRECATED.inc - tripal_file_directory_path in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - @todo Remove. This was not in Tripal 1.x.
- tripal_get_chado_custom_schema in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_get_max_chado_rank in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_get_moddir in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_get_module_active_jobs in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_cancel in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_check_running in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_get_end_time in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_get_start_time in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_get_submit_date in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_launch in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_jobs_rerun in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_job_set_progress in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_library_delete_property in tripal_library/
api/ tripal_library.DEPRECATED.inc - tripal_library_get_property in tripal_library/
api/ tripal_library.DEPRECATED.inc - tripal_library_insert_property in tripal_library/
api/ tripal_library.DEPRECATED.inc - tripal_library_update_property in tripal_library/
api/ tripal_library.DEPRECATED.inc - tripal_mviews_action in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_mviews_get_mview_id in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_organism_get_image_url in tripal_organism/
api/ tripal_organism.DEPRECATED.inc - tripal_organism_get_organism_by_nid in tripal_organism/
api/ tripal_organism.DEPRECATED.inc - tripal_organism_get_organism_by_organism_id in tripal_organism/
api/ tripal_organism.DEPRECATED.inc - tripal_organism_get_synced in tripal_organism/
api/ tripal_organism.DEPRECATED.inc - tripal_project_delete_property in tripal_project/
api/ tripal_project.DEPRECATED.inc - tripal_project_get_property in tripal_project/
api/ tripal_project.DEPRECATED.inc - tripal_project_insert_property in tripal_project/
api/ tripal_project.DEPRECATED.inc - tripal_project_update_property in tripal_project/
api/ tripal_project.DEPRECATED.inc - tripal_pub_add_publication in tripal_pub/
includes/ tripal_pub.pub_importers.inc - Adds a new publication to the Chado, along with all properties and database cross-references. If the publication does not already exist in Chado then it is added. If it does exist nothing is done. If the $update parameter is TRUE then the…
- tripal_pub_add_pub_dbxref in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_delete_property in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_get_property in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_get_pubs_by_dbxref in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_get_pubs_by_title_type_pyear_series in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_get_pub_by_uniquename in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_get_raw_data in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_get_remote_search_results in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_import_by_dbxref in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_import_publications in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_import_publications_by_import_id in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_insert_property in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_update_property in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_pub_update_publications in tripal_pub/
api/ tripal_pub.DEPRECATED.inc - tripal_report_error in tripal_core/
api/ tripal_core.tripal.api.inc - Provide better error notice for Tripal. If the environment variable 'TRIPAL_DEBUG' is set to 1 then this function will add backtrace information to the message.
- tripal_search_update_default_index in tripal_core/
includes/ tripal_core.search.inc - The Search API provides a default node index which has a number of node-specific fields enabled by default. We want to ensure our chado fields are also enabled by default thus making for easier enabling of Tripal search.
- tripal_set_message in tripal_core/
api/ tripal_core.tripal.api.inc - Display messages to tripal administrators.
- tripal_stock_get_all_stocks in tripal_stock/
api/ tripal_stock.DEPRECATED.inc - tripal_stock_get_stocks in tripal_stock/
api/ tripal_stock.DEPRECATED.inc - tripal_stock_get_stocks_by_stockprop in tripal_stock/
api/ tripal_stock.DEPRECATED.inc - tripal_stock_get_stock_by_name_identifier in tripal_stock/
api/ tripal_stock.DEPRECATED.inc - tripal_stock_get_stock_by_nid in tripal_stock/
api/ tripal_stock.DEPRECATED.inc - tripal_stock_get_stock_by_stock_id in tripal_stock/
api/ tripal_stock.DEPRECATED.inc - tripal_update_mview in tripal_core/
api/ tripal_core.DEPRECATED.api.inc - tripal_views_add_field_to_integration in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_admin_disable_view in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_admin_enable_view in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_clone_integration in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_get_integration_array_for_chado_table in tripal_views/
includes/ tripal_views_integration.inc - Returns the array needed to integrate a given chado table with views
- tripal_views_get_lightest_priority_setup in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_get_setup_id in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_get_table_lightest_priority in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_integration_add_entry in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_integration_export_entry in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_integration_remove_entry_by_setup_id in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_integration_remove_entry_by_table_name in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_integration_update_entry in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_is_integrated in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_is_lightest_priority_setup in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_make_view_compatible_with_external in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_rebuild_views_integrations in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_remove_join_from_integration in tripal_views/
api/ tripal_views.DEPRECATED.inc - tripal_views_views_data in tripal_views/
tripal_views.views.inc - Implements hook_views_data().