49 calls to chado_insert_record()
- chado_analysis_insert in legacy/
tripal_analysis/ includes/ tripal_analysis.chado_node.inc - Implements hook_insert(). When a new chado_analysis node is created we also need to add information to our chado_analysis table. This function is called on insert of a new node of type 'chado_analysis' and inserts the necessary information.
- chado_associate_cvterm in tripal_chado/
api/ modules/ tripal_chado.cv.api.inc - Add a record to a cvterm linking table (ie: feature_cvterm).
- chado_associate_dbxref in tripal_chado/
api/ modules/ tripal_chado.db.api.inc - Add a record to a database reference linking table (ie: feature_dbxref).
- chado_contact_insert in legacy/
tripal_contact/ includes/ tripal_contact.chado_node.inc - Implements of hook_insert().
- chado_featuremap_insert in legacy/
tripal_featuremap/ includes/ tripal_featuremap.chado_node.inc - Implements hook_insert().
- chado_feature_insert in legacy/
tripal_feature/ includes/ tripal_feature.chado_node.inc - Implements hook_insert().
- chado_insert_contact in tripal_chado/
api/ modules/ tripal_chado.contact.api.inc - Adds a contact to the Chado contact table.
- chado_insert_cv in tripal_chado/
api/ modules/ tripal_chado.cv.api.inc - Adds a controlled vocabulary to the CV table of Chado.
- chado_insert_cvterm in tripal_chado/
api/ modules/ tripal_chado.cv.api.inc - Add's a controlled vocabulary term to Chado.
- chado_insert_db in tripal_chado/
api/ modules/ tripal_chado.db.api.inc - Adds a new database to the Chado DB table and returns the DB object.
- chado_insert_dbxref in tripal_chado/
api/ modules/ tripal_chado.db.api.inc - Add a database reference.
- chado_insert_phylotree in tripal_chado/
api/ modules/ tripal_chado.phylotree.api.inc - Inserts a phylotree record into Chado.
- chado_insert_property in tripal_chado/
api/ tripal_chado.property.api.inc - Insert a property for a given base table.
- chado_library_insert in legacy/
tripal_library/ includes/ tripal_library.chado_node.inc - Implements hook_insert().
- chado_organism_insert in legacy/
tripal_organism/ includes/ tripal_organism.chado_node.inc - Implements hook_insert().
- chado_phylogeny_import_tree in tripal_chado/
api/ modules/ tripal_chado.phylotree.api.inc - Iterates through the tree array and creates phylonodes in Chado.
- chado_project_insert in legacy/
tripal_project/ includes/ tripal_project.chado_node.inc - Implementation of hook_insert().
- chado_pub_insert in legacy/
tripal_pub/ includes/ tripal_pub.chado_node.inc - Implements hook_insert().
- chado_stock_insert in legacy/
tripal_stock/ includes/ tripal_stock.chado_node.inc - Implements hook_insert(). Inserts data from chado_stock_form() into drupal and chado
- chado_stock_update in legacy/
tripal_stock/ includes/ tripal_stock.chado_node.inc - Implements hook_update(). Handles Editing/Updating of main stock info
- chado_update_node_form_properties in legacy/
tripal_core/ api/ tripal_core.chado_nodes.properties.api.inc - This function is used in hook_insert or hook_update and handles inserting of any new properties
- chado_update_node_form_relationships in legacy/
tripal_core/ api/ tripal_core.chado_nodes.relationships.api.inc - This function is used in hook_insert or hook_update and handles inserting of relationships between the current nodetype and other memebers of the same nodetype
- FASTAImporter::loadFastaFeature in tripal_chado/
includes/ TripalImporter/ FASTAImporter.inc - A helper function for loadFasta() to load a single feature
- GFF3Importer::loadAlias in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load any aliases for a feature
- GFF3Importer::loadDbxref in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load the dbxref attribute for a feature
- GFF3Importer::loadDerivesFrom in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load the derives from attribute for a gff3 feature
- GFF3Importer::loadFeature in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Create the feature record & link it to it's analysis
- GFF3Importer::loadFeatureLoc in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Insert the location of the feature
- GFF3Importer::loadGFF3 in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Actually load a GFF3 file. This is the function called by tripal jobs
- GFF3Importer::loadOntology in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load the cvterms for a feature.
- GFF3Importer::loadParents in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load the parents for a gff3 feature
- GFF3Importer::loadProperty in tripal_chado/
includes/ TripalImporter/ GFF3Importer.inc - Load a preoprty (featurepop) for the feature
- OBOImporter::addCvtermDbxref in tripal_chado/
includes/ TripalImporter/ OBOImporter.inc - Adds a database reference to a cvterm
- OBOImporter::addCvtermProp in tripal_chado/
includes/ TripalImporter/ OBOImporter.inc - Adds a property to a cvterm
- OBOImporter::addDbxref in tripal_chado/
includes/ TripalImporter/ OBOImporter.inc - Adds a database cross reference to a cvterm
- OBOImporter::addRelationship in tripal_chado/
includes/ TripalImporter/ OBOImporter.inc - Adds a cvterm relationship
- OBOImporter::addSynonym in tripal_chado/
includes/ TripalImporter/ OBOImporter.inc - Adds the synonyms to a term
- OBOImporter::parse in tripal_chado/
includes/ TripalImporter/ OBOImporter.inc - Parse the OBO file and populate the templ loading table
- process_data_array_for_line in tripal_bulk_loader/
includes/ tripal_bulk_loader.loader.inc - Process the data array for a given line
- schema__alternate_name_widget::submit in tripal_chado/
includes/ TripalFields/ schema__alternate_name/ schema__alternate_name_widget.inc - TaxonomyImporter::addDbxref in tripal_chado/
includes/ TripalImporter/ TaxonomyImporter.inc - TaxonomyImporter::addOrganism in tripal_chado/
includes/ TripalImporter/ TaxonomyImporter.inc - Adds a new organism record to Chado.
- tripal_chado_db_add_form_submit in tripal_chado/
includes/ tripal_chado.db.inc - Submit for add db form
- tripal_chado_field_storage_write_table in tripal_chado/
includes/ tripal_chado.field_storage.inc - Write (inserts/updates/deletes) values for a Chado table.
- tripal_core_chado_insert in legacy/
tripal_core/ api/ tripal_core.DEPRECATED.inc - tripal_cv_cv_add_form_submit in tripal_chado/
includes/ tripal_chado.cv.inc - Submit cv add form
- tripal_featuremap_add_featuremap_dbxref in legacy/
tripal_featuremap/ api/ tripal_featuremap.DEPRECATED.inc - tripal_pub_add_authors in tripal_chado/
includes/ loaders/ tripal_chado.pub_importers.inc - Add one or more authors to a publication
- tripal_pub_add_publication in tripal_chado/
includes/ loaders/ tripal_chado.pub_importers.inc - Adds a new publication to the Chado, along with all properties and database cross-references. If the publication does not already exist in Chado then it is added. If it does exist nothing is done. If the $update parameter is TRUE then theā¦