Tripal Chado Views Module
Provides functions for integrating chado with Drupal Views.
File
- tripal_chado_views/
tripal_chado_views.module, line 7 - Basic Tripal Views functionality
Functions
Name |
Location | Description |
|---|---|---|
| tripal_chado_views_admin_integration_view |
tripal_chado_views/ |
Admin launchpad |
| tripal_chado_views_biological_data_page |
tripal_chado_views/ |
A landing page for all views of chado content. Simply lists all menu items that are children of it. |
| tripal_chado_views_coder_ignore |
tripal_chado_views/ |
Implements hook_coder_ignore(). Defines the path to the file (tripal_views.coder_ignores.txt) where ignore rules for coder are stored |
| tripal_chado_views_defaultview_admin_integrations |
tripal_chado_views/ |
Default integrations administration view |
| tripal_chado_views_delete_all_integrations |
tripal_chado_views/ |
Purpose: Deletes ALL Chado Views Integrations. |
| tripal_chado_views_get_integration_array_for_chado_table |
tripal_chado_views/ |
Returns the array needed to integrate a given chado table with views |
| tripal_chado_views_get_schemas |
tripal_chado_views/ |
This function simply defines all tables needed for the module to work correctly. By putting the table definitions in a separate function we can easily provide the entire list for hook_install or individual tables for an update. |
| tripal_chado_views_help |
tripal_chado_views/ |
Implements hook_help(). Adds a help page to the module list |
| tripal_chado_views_init |
tripal_chado_views/ |
Implements hook_init(). |
| tripal_chado_views_install |
tripal_chado_views/ |
Implementation of hook_install(). |
| tripal_chado_views_integrate_all_chado_tables |
tripal_chado_views/ |
Integrate all chado tables in the schema api. This integration only occurs once and sets all Chado tables to a priority of 10 |
| tripal_chado_views_integration_delete |
tripal_chado_views/ |
Purpose: Deletes integration of a table with the Views module. This function is meant to be called from a menu item. After completion it redirects the user to the views intergation page. |
| tripal_chado_views_integration_delete_all_form |
tripal_chado_views/ |
Purpose: Deletes ALL Chado Views Integrations. This function is meant to be called from a menu item. After completion it redirects the user to the views intergation page. |
| tripal_chado_views_integration_delete_all_form_submit |
tripal_chado_views/ |
Purpose: Deletes ALL Chado Views Integrations. This function is meant to be called from a menu item. After completion it redirects the user to the views intergation page. |
| tripal_chado_views_integration_discover_handlers |
tripal_chado_views/ |
Purpose: this function queries all modules currently enabled on the site looking for custom handlers and returns a list of all available handerls. The base View handlers are also included. |
| tripal_chado_views_integration_export_form |
tripal_chado_views/ |
Form: The form to export a particular tripal views integration |
| tripal_chado_views_integration_form |
tripal_chado_views/ |
Purpose: defines the web form used for specifing the base table, joins and handlers when integrating a table with views. This form is used for both creating a new record and editing an existing record. |
| tripal_chado_views_integration_form_submit |
tripal_chado_views/ |
Purpose: inserts or updates the record in the tripal views integration tables. This function is only called if validation is passed. |
| tripal_chado_views_integration_form_validate |
tripal_chado_views/ |
Purpose: validates the tripal_chado_views_integration_form after submission |
| tripal_chado_views_integration_import_form |
tripal_chado_views/ |
Form: Imports a tripal views integration |
| tripal_chado_views_integration_import_form_submit |
tripal_chado_views/ |
Submit: Imports a tripal views integration |
| tripal_chado_views_integration_setup_list |
tripal_chado_views/ |
Purpose: Generates a themable table containing the list of integrated tables The look-and-feel of the table can be altered by overriding the theme for tables. |
| tripal_chado_views_menu |
tripal_chado_views/ |
Implements hook_menu(). This hook provides details about new menu items added by this module |
| tripal_chado_views_permission |
tripal_chado_views/ |
Implements hook_permissions(). |
| tripal_chado_views_schema |
tripal_chado_views/ |
Implementation of hook_schema(). |
| tripal_chado_views_theme |
tripal_chado_views/ |
Implements hook_theme(). |
| tripal_chado_views_views_api |
tripal_chado_views/ |
Implements hook_views_api(). |
| tripal_chado_views_views_data |
tripal_chado_views/ |
Implements hook_views_data(). |
| tripal_chado_views_views_data_alter |
tripal_chado_views/ |
Implements hook_views_data_alter(). Used to add Chado <-> Node Joins & Relationships since you need to add to the $data['node'] to do this |
| tripal_chado_views_views_data_tripal_views_tables |
tripal_chado_views/ |
Describes the tripal views integration tables to views for the administration views |
| tripal_chado_views_views_default_views |
tripal_chado_views/ |
Implements hook_views_default_views(). |
| tripal_chado_views_views_handlers |
tripal_chado_views/ |
Implements hook_views_handlers(). |
| tripal_chado_views_views_pre_render |
tripal_chado_views/ |
Implements hook_views_pre_render(). |
| tripal_chado_views_views_pre_view |
tripal_chado_views/ |
Implementation of hook_views_pre_view(). |
| tripal_chado_views_views_schema |
tripal_chado_views/ |
Describe the Tripal Views Schema |