remote__data.inc
File
tripal_ws/includes/TripalFields/remote__data/remote__data.incView source
- <?php
- /**
- * @class
- * Purpose:
- *
- * Data:
- * Assumptions:
- */
- class remote__data extends WebServicesField {
-
- // --------------------------------------------------------------------------
- // EDITABLE STATIC CONSTANTS
- //
- // The following constants SHOULD be set for each descendant class. They are
- // used by the static functions to provide information to Drupal about
- // the field and it's default widget and formatter.
- // --------------------------------------------------------------------------
- // The default label for this field.
- public static $default_label = 'Remote Tripal Site';
-
- // The default description for this field.
- public static $default_description = 'Allows for inclusion of remote data from another Tripal site.';
-
- // The default widget for this field.
- public static $default_widget = 'remote__data_widget';
-
- // The default formatter for this field.
- public static $default_formatter = 'remote__data_formatter';
-
- // The module that manages this field.
- public static $module = 'tripal_ws';
-
- // A list of global settings. These can be accessed within the
- // globalSettingsForm. When the globalSettingsForm is submitted then
- // Drupal will automatically change these settings for all fields.
- // Once instances exist for a field type then these settings cannot be
- // changed.
- public static $default_settings = array(
- 'storage' => 'field_tripal_ws_storage',
- // It is expected that all fields set a 'value' in the load() function.
- // In many cases, the value may be an associative array of key/value pairs.
- // In order for Tripal to provide context for all data, the keys should
- // be a controlled vocabulary term (e.g. rdfs:type). Keys in the load()
- // function that are supported by the query() function should be
- // listed here.
- 'searchable_keys' => array(),
- );
-
- // Provide a list of instance specific settings. These can be access within
- // the instanceSettingsForm. When the instanceSettingsForm is submitted
- // then Drupal with automatically change these settings for the instance.
- // It is recommended to put settings at the instance level whenever possible.
- // If you override this variable in a child class be sure to replicate the
- // term_name, term_vocab, term_accession and term_fixed keys as these are
- // required for all TripalFields.
- public static $default_instance_settings = array(
- // The short name for the vocabulary (e.g. schema, SO, GO, PATO, etc.).
- 'term_vocabulary' => 'schema',
- // The name of the term.
- 'term_name' => 'Thing',
- // The unique ID (i.e. accession) of the term.
- 'term_accession' => 'property',
- // Set to TRUE if the site admin is not allowed to change the term
- // type, otherwise the admin can change the term mapped to a field.
- 'term_fixed' => FALSE,
- // Indicates if this field should be automatically attached to display
- // or web services or if this field should be loaded separately. This
- // is convenient for speed. Fields that are slow should for loading
- // should have auto_attach set to FALSE so tha their values can be
- // attached asynchronously.
- 'auto_attach' => FALSE,
- // Settings to allow the site admin to set the remote data source info.
- 'data_info' => array(
- 'query' => '',
- 'remote_site' => '',
- 'description' => '',
- 'rd_field_name' => '',
- 'site_logo' => '',
- ),
- );
-
- // A boolean specifying that users should not be allowed to create
- // fields and instances of this field type through the UI. Such
- // fields can only be created programmatically with field_create_field()
- // and field_create_instance().
- public static $no_ui = FALSE;
-
- // A boolean specifying that the field will not contain any data. This
- // should exclude the field from web services or downloads. An example
- // could be a quick search field that appears on the page that redirects
- // the user but otherwise provides no data.
- public static $no_data = FALSE;
-
- // Holds an object describing the remote site that tihs field connects to.
- private $remote_site = NULL;
-
- // Set to TRUE if this field is being loaded via web services. WE don't
- // want remote fields loaded when a web-service call is made.
- private $loaded_via_ws = FALSE;
-
- public function __construct($field, $instance) {
- parent::__construct($field, $instance);
-
- // This field should not do anything if it is loaded via web-services.
- // We don't want remote content to be available in web services. There
- // is an if statement to not show this field in the web services but the
- // entity_load function doesn't know this field shouldn't be loaded so
- // we need to short-circuit that.
- $_SERVER['REQUEST_URI'];
- if (preg_match('/^web-services/', $_SERVER['REQUEST_URI'])) {
- $this->loaded_via_ws = TRUE;
- return;
- }
-
- // Get the site url from the tripal_sites table.
- if (array_key_exists('data_info', $instance['settings'])) {
- $site_id_ws = $instance['settings']['data_info']['remote_site'];
- if ($site_id_ws) {
- $this->remote_site = db_select('tripal_sites', 'ts')
- ->fields('ts')
- ->condition('ts.id', $site_id_ws)
- ->execute()
- ->fetchObject();
- }
- }
- }
- /**
- * @see WebServicesField::load()
- */
- public function load($entity) {
-
- $field_name = $this->field['field_name'];
- $field_type = $this->field['type'];
-
- // Set some defaults for the empty record.
- $entity->{$field_name}['und'][0] = array(
- 'value' => array(),
- 'remote_entity' => array(),
- );
-
- // If this field is being loaded via web services then just return.
- if ($this->loaded_via_ws == TRUE) {
- return;
- }
-
- // Get the query set by the admin for this field and replace any tokesn
- $query_str = $this->instance['settings']['data_info']['query'];
- $bundle = tripal_load_bundle_entity(array('name' => $entity->bundle));
- $query_str = tripal_replace_entity_tokens($query_str, $entity, $bundle);
-
- // Make the request.
- $data = $this->makeRemoteRequest($query_str);
- if(!$data){
- return;
- }
-
- $total_items = $data['totalItems'];
-
- // Iterate through the members returned and save those for the field.
- for ($i = 0; $i < count($data['members']); $i++) {
- $member = $data['members'][$i];
-
- // Get the cotent type and remote entity id
- $content_type = $member['@type'];
- $remote_entity_id = $member['@id'];
- $remote_entity_id = preg_replace('/^.*\/(\d+)/', '$1', $remote_entity_id);
-
- // Save the member information for use later.
- $entity->{$field_name}['und'][$i]['remote_entity'] = $member;
-
- // Separate the query_field if it has subfields.
- $rd_field_name = $this->instance['settings']['data_info']['rd_field_name'];
- $subfields = explode(',', $rd_field_name);
- $query_field = $subfields[0];
-
- // Next get the the details about this member.
- $query_field_url = $content_type . '/' . $remote_entity_id . '/' . $query_field;
- $field_data = $this->makeRemoteRequest($query_field_url);
- if(!$field_data){
- // If we encounter any type of error, we'll reset the field and return.
- $entity->{$field_name}['und'] = array();
- $entity->{$field_name}['und'][0] = array(
- 'value' => array(),
- 'remote_entity' => array(),
- );
- return;
- }
-
- // Set the field data as the value.
- $field_data_type = $field_data['@type'];
- $entity->{$field_name}['und'][$i]['value'] = $field_data;
- }
- }
- /**
- * Makes a request to a remote Tripal web services site.
- *
- * @param $query
- * The query string. This string is added to the URL for the remote
- * website.
- */
- private function makeRemoteRequest($query) {
- $ctype = $query;
- $qdata = '';
- if (preg_match('/\?/', $query)) {
- list($ctype, $qdata) = explode('?', $query);
- }
-
- $data = tripal_get_remote_content($this->remote_site->site_id, $query);
-
- return $data;
- }
- /**
- *
- * @see TripalField::settingsForm()
- */
- public function instanceSettingsForm() {
- $element = parent::instanceSettingsForm();
-
- // Get the setting for the option for how this widget.
- $instance = $this->instance;
- $settings = '';
- $site_list = '';
-
- $tokens = array();
- // Get the form info from the bundle about to be saved.
- $bundle = tripal_load_bundle_entity(array('name' => $instance['bundle']));
- // Retrieve all available tokens.
- $tokens = tripal_get_entity_tokens($bundle);
-
- $element['data_info'] = array(
- '#type' => 'fieldset',
- '#title' => 'Remote Data Settings',
- '#description' => 'These settings allow you to provide a Tripal web
- services query to identify content on another Tripal site and display
- that here within this field. You must specify the query to execute and
- the field to display.',
- '#collapsible' => TRUE,
- '#collapsed' => FALSE,
- '#prefix' => "<div id='set_titles-fieldset'>",
- '#suffix' => '</div>',
- );
-
- // Get the site info from the tripal_sites table.
- $sites = db_select('tripal_sites', 's')
- ->fields('s')
- ->execute()->fetchAll();
-
- foreach ($sites as $site) {
- $rows[$site->id] =$site->name;
- }
-
- $element['data_info']['remote_site'] = array(
- '#type' => 'select',
- '#title' => t('Remote Tripal Site'),
- '#options' => $rows,
- '#default_value' => $this->instance['settings']['data_info']['remote_site'],
- );
-
- $element['data_info']['query'] = array(
- '#type' => 'textarea',
- '#title' => 'Query to Execute',
- '#description' => 'Build the query string that should be appended after the url. The tokens
- listed below may be used in your query build.',
- '#default_value' => $this->instance['settings']['data_info']['query'],
- '#rows' => 5,
- '#required' => TRUE
- );
- $element['data_info']['rd_field_name'] = array(
- '#type' => 'textfield',
- '#title' => 'Field to Display',
- '#description' => 'The results returned by the query should match
- entities (or records) from the selected remote site. That entity
- will have multiple fields. Only one remote field can be shown by
- this field. Please enter the name of the field you would like
- to display. Some fields have "subfields". You can display a subfield
- rather than the entire field by entering a comma-separated sequence
- of subfields. For example, for relationships, you may only want to
- show the "clause", therefore, the entry here would be: realtionship,clause.',
- '#default_value' => $this->instance['settings']['data_info']['rd_field_name'],
- '#required' => TRUE
- );
- $element['data_info']['token_display']['tokens'] = array(
- '#type' => 'hidden',
- '#value' => serialize($tokens)
- );
-
- $element['data_info']['token_display'] = array(
- '#type' => 'fieldset',
- '#title' => 'Available Tokens',
- '#description' => 'Copy the token and paste it into the "Query" text field above.',
- '#collapsible' => TRUE,
- '#collapsed' => TRUE
- );
-
- $element['data_info']['token_display']['content'] = array(
- '#type' => 'item',
- '#markup' => theme_token_list($tokens),
- );
-
- $element['data_info']['description'] = array(
- '#type' => 'textarea',
- '#title' => 'Description',
- '#description' => 'Describe the data being pulled in.',
- '#default_value' => $this->instance['settings']['data_info']['description'],
- '#rows' => 1
- );
-
- $fid = $this->instance['settings']['data_info']['site_logo'] ? $this->instance['settings']['data_info']['site_logo'] : NULL;
- $file = NULL;
- if ($fid) {
- $file = file_load($fid);
- }
- $element['data_info']['site_logo'] = array(
- '#title' => 'Remote Site Logo',
- '#description' => t('When data is taken from a remote site and shown to the user,
- the site from which the data was retrieved is indicated. If you would like to
- include the logo for the remote site, please upload an image here.'),
- '#type' => 'managed_file',
- '#default_value' => $file ? $file->fid : NULL,
- '#theme' => 'image_widget',
- '#attached' => array(
- 'css' => array(
- 'image-preview' => drupal_get_path('module', 'image') . '/image.css',
- ),
- ),
- 'preview' => array(
- '#markup' => theme('image_style', array('style_name' => 'thumbnail', 'path' => $file ? $file->uri : '')),
- ),
- );
-
- return $element;
- }
-
- /**
- *
- * @param unknown $form
- * @param unknown $form_state
- */
- public function instanceSettingsFormValidate($form, &$form_state) {
- $site_logo = $form_state['values']['instance']['settings']['data_info']['site_logo'];
-
- // If we have a site logo then add usage information.
- if ($site_logo) {
- $file = file_load($site_logo);
- $file_usage = file_usage_list($file);
- if (!array_key_exists('tripal_ws', $file_usage)) {
- file_usage_add($file, 'tripal_ws', 'site-logo', 1);
- }
- }
- }
-
-
- }