function tripal_chado_chado_get_v1_3_tables

3.x tripal_chado.schema_v1.3.api.inc tripal_chado_chado_get_v1_3_tables()

Lists the table names in the v1.3 chado schema

Return value

An array containing all of the table names

1 call to tripal_chado_chado_get_v1_3_tables()
chado_get_table_names in tripal_chado/api/tripal_chado.schema.api.inc
Retrieves the list of tables in the Chado schema. By default it only returns the default Chado tables, but can return custom tables added to the Chado schema if requested

File

tripal_chado/api/tripal_chado.schema_v1.3.api.inc, line 18049
Describes the chado tables in version 1.3

Code

function tripal_chado_chado_get_v1_3_tables() {
  $tables = array(
    'acquisition',
    'acquisitionprop',
    'acquisition_relationship',
    'analysis',
    'analysis_cvterm',
    'analysis_dbxref',
    'analysisfeature',
    'analysisfeatureprop',
    'analysis_organism',
    'analysisprop',
    'analysis_pub',
    'analysis_relationship',
    'arraydesign',
    'arraydesignprop',
    'assay',
    'assay_biomaterial',
    'assay_project',
    'assayprop',
    'biomaterial',
    'biomaterial_dbxref',
    'biomaterialprop',
    'biomaterial_relationship',
    'biomaterial_treatment',
    'cell_line',
    'cell_line_cvterm',
    'cell_line_cvtermprop',
    'cell_line_dbxref',
    'cell_line_feature',
    'cell_line_library',
    'cell_lineprop',
    'cell_lineprop_pub',
    'cell_line_pub',
    'cell_line_relationship',
    'cell_line_synonym',
    'chadoprop',
    'channel',
    'contact',
    'contactprop',
    'contact_relationship',
    'control',
    'cv',
    'cvprop',
    'cv_root_mview',
    'cvterm',
    'cvterm_dbxref',
    'cvtermpath',
    'cvtermprop',
    'cvterm_relationship',
    'cvtermsynonym',
    'db',
    'dbprop',
    'dbxref',
    'dbxrefprop',
    'eimage',
    'element',
    'element_relationship',
    'elementresult',
    'elementresult_relationship',
    'environment',
    'environment_cvterm',
    'expression',
    'expression_cvterm',
    'expression_cvtermprop',
    'expression_image',
    'expressionprop',
    'expression_pub',
    'feature',
    'feature_contact',
    'feature_cvterm',
    'feature_cvterm_dbxref',
    'feature_cvtermprop',
    'feature_cvterm_pub',
    'feature_dbxref',
    'feature_expression',
    'feature_expressionprop',
    'feature_genotype',
    'featureloc',
    'featureloc_pub',
    'featuremap',
    'featuremap_contact',
    'featuremap_dbxref',
    'featuremap_organism',
    'featuremapprop',
    'featuremap_pub',
    'feature_phenotype',
    'featurepos',
    'featureposprop',
    'featureprop',
    'featureprop_pub',
    'feature_pub',
    'feature_pubprop',
    'featurerange',
    'feature_relationship',
    'feature_relationshipprop',
    'feature_relationshipprop_pub',
    'feature_relationship_pub',
    'feature_synonym',
    'genotype',
    'genotypeprop',
    'library',
    'library_contact',
    'library_cvterm',
    'library_dbxref',
    'library_expression',
    'library_expressionprop',
    'library_feature',
    'library_featureprop',
    'libraryprop',
    'libraryprop_pub',
    'library_pub',
    'library_relationship',
    'library_relationship_pub',
    'library_synonym',
    'magedocumentation',
    'mageml',
    'materialized_view',
    'nd_experiment',
    'nd_experiment_analysis',
    'nd_experiment_contact',
    'nd_experiment_dbxref',
    'nd_experiment_genotype',
    'nd_experiment_phenotype',
    'nd_experiment_project',
    'nd_experimentprop',
    'nd_experiment_protocol',
    'nd_experiment_pub',
    'nd_experiment_stock',
    'nd_experiment_stock_dbxref',
    'nd_experiment_stockprop',
    'nd_geolocation',
    'nd_geolocationprop',
    'nd_protocol',
    'nd_protocolprop',
    'nd_protocol_reagent',
    'nd_reagent',
    'nd_reagentprop',
    'nd_reagent_relationship',
    'organism',
    'organism_cvterm',
    'organism_cvtermprop',
    'organism_dbxref',
    'organism_feature_count',
    'organismprop',
    'organismprop_pub',
    'organism_pub',
    'organism_relationship',
    'phendesc',
    'phenotype',
    'phenotype_comparison',
    'phenotype_comparison_cvterm',
    'phenotype_cvterm',
    'phenotypeprop',
    'phenstatement',
    'phylonode',
    'phylonode_dbxref',
    'phylonode_organism',
    'phylonodeprop',
    'phylonode_pub',
    'phylonode_relationship',
    'phylotree',
    'phylotreeprop',
    'phylotree_pub',
    'project',
    'project_analysis',
    'project_contact',
    'project_dbxref',
    'project_feature',
    'projectprop',
    'project_pub',
    'project_relationship',
    'project_stock',
    'protocol',
    'protocolparam',
    'pub',
    'pubauthor',
    'pubauthor_contact',
    'pub_dbxref',
    'pubprop',
    'pub_relationship',
    'quantification',
    'quantificationprop',
    'quantification_relationship',
    'stock',
    'stockcollection',
    'stockcollection_db',
    'stockcollectionprop',
    'stockcollection_stock',
    'stock_cvterm',
    'stock_cvtermprop',
    'stock_dbxref',
    'stock_dbxrefprop',
    'stock_feature',
    'stock_featuremap',
    'stock_genotype',
    'stock_library',
    'stockprop',
    'stockprop_pub',
    'stock_pub',
    'stock_relationship',
    'stock_relationship_cvterm',
    'stock_relationship_pub',
    'study',
    'study_assay',
    'studydesign',
    'studydesignprop',
    'studyfactor',
    'studyfactorvalue',
    'studyprop',
    'studyprop_feature',
    'synonym',
    'tableinfo',
    'treatment',
  );
  return $tables;
}