105 calls to chado_generate_var()

chado_analysis_load in legacy/tripal_analysis/includes/tripal_analysis.chado_node.inc: Implements hook_load(). When a node is requested by the user this function is called to allow us to add auxiliary data to the node object.
chado_contact_load in legacy/tripal_contact/includes/tripal_contact.chado_node.inc: Implements hook_load().
chado_expand_var in tripal_chado/api/tripal_chado.variables.api.inc: Retrieves fields, or tables that were excluded by default from a variable.
chado_featuremap_load in legacy/tripal_featuremap/includes/tripal_featuremap.chado_node.inc: Implements hook_load().
chado_feature_load in legacy/tripal_feature/includes/tripal_feature.chado_node.inc: Implements hook_load().
chado_get_analysis in tripal_chado/api/modules/tripal_chado.analysis.api.inc: Retrieves a chado analysis variable.
chado_get_cv in tripal_chado/api/modules/tripal_chado.cv.api.inc: Retrieves a chado controlled vocabulary variable
chado_get_cvterm in tripal_chado/api/modules/tripal_chado.cv.api.inc: Retrieves a chado controlled vocabulary term variable.
chado_get_cvterm_mapping in tripal_chado/api/tripal_chado.schema.api.inc: Get information about which Chado base table a cvterm is mapped to.
chado_get_db in tripal_chado/api/modules/tripal_chado.db.api.inc: Retrieves a chado db variable.
chado_get_dbxref in tripal_chado/api/modules/tripal_chado.db.api.inc: Retrieves a chado database reference variable.
chado_get_fasta_defline in tripal_chado/api/modules/tripal_chado.feature.api.inc: Returns a definition line that can be used in a FASTA file.
chado_get_feature_sequences in tripal_chado/api/modules/tripal_chado.feature.api.inc: Retrieves the sequences for a given feature.
chado_get_minimal_pub_info in tripal_chado/api/modules/tripal_chado.pub.api.inc: Retrieves the minimal information to uniquely describe any publication.
chado_get_multiple_stocks in tripal_chado/api/modules/tripal_chado.stock.api.inc: Retrieves a chado stock variable.
chado_get_organism in tripal_chado/api/modules/tripal_chado.organism.api.inc: Retrieves a chado organism variable.
chado_get_property in tripal_chado/api/tripal_chado.property.api.inc: Retrieve a property for a given base table record.
chado_get_publication in tripal_chado/api/modules/tripal_chado.pub.api.inc: Retrieves a chado publication array.
chado_get_record_with_property in tripal_chado/api/tripal_chado.property.api.inc: Get all records in the base table assigned one or more properties.
chado_get_semweb_column in tripal_chado/api/tripal_chado.semweb.api.inc: Retreive the column name in a Chado table that matches a given term.
chado_get_semweb_term in tripal_chado/api/tripal_chado.semweb.api.inc: Retrieves the term that maps to the given Chado table and field.
chado_get_stock in tripal_chado/api/modules/tripal_chado.stock.api.inc: Retrieves a chado stock variable
chado_get_table_property_types in tripal_chado/api/tripal_chado.property.api.inc: Retrieves all of the property types currently availalbe in a prop table.
chado_library_load in legacy/tripal_library/includes/tripal_library.chado_node.inc: Implements hook_load().
chado_linker__contact_widget::validate in tripal_chado/includes/TripalFields/chado_linker__contact/chado_linker__contact_widget.inc
chado_organism_load in legacy/tripal_organism/includes/tripal_organism.chado_node.inc: Implements hook_load().
chado_phylogeny_get_node_types_vocab in tripal_chado/api/modules/tripal_chado.phylotree.api.inc: Get the vocabulary terms used to describe nodes in the tree.
chado_phylogeny_import_tree_file in tripal_chado/api/modules/tripal_chado.phylotree.api.inc: Imports a tree file.
chado_phylotree_load in legacy/tripal_phylogeny/includes/tripal_phylogeny.chado_node.inc: Implements hook_load().
chado_project_load in legacy/tripal_project/includes/tripal_project.chado_node.inc: Implementation of hook_load().
chado_publish_records in tripal_chado/api/tripal_chado.api.inc: Publishes content in Chado as a new TripalEntity entity.
chado_pub_load in legacy/tripal_pub/includes/tripal_pub.chado_node.inc: Implements hook_load().
chado_stock_load in legacy/tripal_stock/includes/tripal_stock.chado_node.inc: Implements hook_load().
chado_update_existing_node_urls in legacy/tripal_core/api/tripal_core.chado_nodes.title_and_path.inc: Tripal Job for updating all node URLs for a particular node type.
chado_validate_phylotree in tripal_chado/api/modules/tripal_chado.phylotree.api.inc: Validates an $options array for insert or update of a phylotree record.
data__accession_widget::submit in tripal_chado/includes/TripalFields/data__accession/data__accession_widget.inc
data__accession_widget::validate in tripal_chado/includes/TripalFields/data__accession/data__accession_widget.inc
data__accession_widget_form_ajax_callback in tripal_chado/includes/TripalFields/data__accession/data__accession_widget.inc: An Ajax callback for the tripal_chado_admin_publish_form..
local__contact_widget::validate in tripal_chado/includes/TripalFields/local__contact/local__contact_widget.inc
ogi__location_on_map::load in tripal_chado/includes/TripalFields/ogi__location_on_map/ogi__location_on_map.inc
sbo__database_cross_reference_widget::validate in tripal_chado/includes/TripalFields/sbo__database_cross_reference/sbo__database_cross_reference_widget.inc
sbo__relationship_widget::validate in tripal_chado/includes/TripalFields/sbo__relationship/sbo__relationship_widget.inc
schema__additional_type_widget::form in tripal_chado/includes/TripalFields/schema__additional_type/schema__additional_type_widget.inc
schema__alternate_name_widget::form in tripal_chado/includes/TripalFields/schema__alternate_name/schema__alternate_name_widget.inc
schema__alternate_name_widget::submit in tripal_chado/includes/TripalFields/schema__alternate_name/schema__alternate_name_widget.inc
schema__alternate_name_widget::validate in tripal_chado/includes/TripalFields/schema__alternate_name/schema__alternate_name_widget.inc
schema__publication_widget::validate in tripal_chado/includes/TripalFields/schema__publication/schema__publication_widget.inc
sio__annotation::load in tripal_chado/includes/TripalFields/sio__annotation/sio__annotation.inc
sio__annotation::validate in tripal_chado/includes/TripalFields/sio__annotation/sio__annotation.inc
sio__annotation_formatter::view in tripal_chado/includes/TripalFields/sio__annotation/sio__annotation_formatter.inc
sio__annotation_widget::form in tripal_chado/includes/TripalFields/sio__annotation/sio__annotation_widget.inc
sio__annotation_widget::submit in tripal_chado/includes/TripalFields/sio__annotation/sio__annotation_widget.inc
sio__references::load in tripal_chado/includes/TripalFields/sio__references/sio__references.inc
tripal_admin_add_type_form in tripal/includes/TripalBundleUIController.inc: Form for creating tripal data types.
tripal_admin_add_type_form_validate in tripal/includes/TripalBundleUIController.inc: Implements hook_validate() for the tripal_admin_add_type_form.
tripal_analysis_node_insert in legacy/tripal_analysis/includes/tripal_analysis.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_chado_bundle_create in tripal_chado/includes/tripal_chado.bundle.inc
tripal_chado_bundle_fields_info_linker in tripal_chado/includes/tripal_chado.fields.inc
tripal_chado_bundle_instances_info_linker in tripal_chado/includes/tripal_chado.fields.inc
tripal_chado_entity_load in tripal_chado/includes/tripal_chado.entity.inc: Implements hook_entity_load().
tripal_chado_field_storage_bundle_mapping_form_add_prop in tripal_chado/includes/tripal_chado.field_storage.inc
tripal_chado_field_storage_bundle_mapping_form_validate in tripal_chado/includes/tripal_chado.field_storage.inc: Implements hook_field_stoage_bundle_mapping_form_validate().
tripal_chado_field_storage_pre_load in tripal_chado/includes/tripal_chado.field_storage.inc: Implements hook_field_storage_pre_load().
tripal_chado_pub_search_page in tripal_chado/includes/tripal_chado.pub_search.inc: The page that contains the publication search form and the results for the search
tripal_chado_semweb_edit_form in tripal_chado/includes/tripal_chado.semweb.inc: Implements hook_form() Edit terms used by the semantic web
tripal_chado_semweb_form in tripal_chado/includes/tripal_chado.semweb.inc: Adds defaults to the chado_semweb table.
tripal_chado_vocab_get_root_terms in tripal_chado/includes/tripal_chado.vocab_storage.inc: Implements hook_vocab_get_root_terms().
tripal_chado_vocab_get_term in tripal_chado/includes/tripal_chado.vocab_storage.inc: Implements hook_vocab_get_term().
tripal_chado_vocab_get_terms in tripal_chado/includes/tripal_chado.vocab_storage.inc: Implements hook_vocab_get_terms().
tripal_chado_vocab_get_term_children in tripal_chado/includes/tripal_chado.vocab_storage.inc: Implements hook_vocab_get_term_children().
tripal_contact_node_insert in legacy/tripal_contact/includes/tripal_contact.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_contact_publications.tpl.php in legacy/tripal_contact/theme/templates/tripal_contact_publications.tpl.php
tripal_core_generate_chado_var in legacy/tripal_core/api/tripal_core.DEPRECATED.inc
tripal_cv_add_cvterm_form_fields in tripal_chado/includes/tripal_chado.cv.inc: Form fields in common between add/edit forms
tripal_featuremap_node_insert in legacy/tripal_featuremap/includes/tripal_featuremap.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_featuremap_publication.tpl.php in legacy/tripal_featuremap/theme/templates/tripal_featuremap_publication.tpl.php
tripal_feature_nd_genotypes.tpl.php in legacy/tripal_natural_diversity/theme/templates/tripal_feature_nd_genotypes.tpl.php
tripal_feature_node_insert in legacy/tripal_feature/includes/tripal_feature.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_feature_preprocess_tripal_feature_alignments in legacy/tripal_feature/theme/tripal_feature.theme.inc
tripal_feature_publications.tpl.php in legacy/tripal_feature/theme/templates/tripal_feature_publications.tpl.php
tripal_field_instance_settings_form_alter_process in tripal/includes/tripal.fields.inc: Implements a process function for the instance settings form.
tripal_field_instance_settings_form_alter_validate in tripal/includes/tripal.fields.inc: Validate our custom instance settings form fields.
tripal_get_term_lookup_form in tripal/api/tripal.terms.api.inc: Provides a term lookup form.
tripal_get_term_lookup_form_result in tripal/api/tripal.terms.api.inc: Returns the terms selected from the tripal_get_term_lookup_form.
tripal_library_features.tpl.php in legacy/tripal_library/theme/templates/tripal_library_features.tpl.php
tripal_library_node_insert in legacy/tripal_library/includes/tripal_library.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_library_publications.tpl.php in legacy/tripal_library/theme/templates/tripal_library_publications.tpl.php
tripal_organism_feature_browser.tpl.php in legacy/tripal_feature/theme/templates/tripal_organism_feature_browser.tpl.php
tripal_organism_node_insert in legacy/tripal_organism/includes/tripal_organism.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_phylogeny_ajax_get_tree_json in tripal_chado/includes/tripal_chado.phylotree.inc: Get json representation of a phylotree id.
tripal_phylogeny_node_insert in legacy/tripal_phylogeny/includes/tripal_phylogeny.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_phylogeny_node_update in legacy/tripal_phylogeny/includes/tripal_phylogeny.chado_node.inc: Implements hook_node_update(). Acts on all content types.
tripal_phylogeny_taxonomy_view in legacy/tripal_phylogeny/includes/tripal_phylogeny.taxonomy.inc: Generates a page that contains the taxonomy view.
tripal_project_node_insert in legacy/tripal_project/includes/tripal_project.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_project_publications.tpl.php in legacy/tripal_project/theme/templates/tripal_project_publications.tpl.php
tripal_pub_base.tpl.php in legacy/tripal_pub/theme/templates/tripal_pub_base.tpl.php
tripal_pub_get_publication_array in tripal_chado/includes/loaders/tripal_chado.pub_importers.inc: This function generates an array suitable for use with the tripal_pub_create_citation function for any publication already stored in the Chado tables.
tripal_pub_node_insert in legacy/tripal_pub/includes/tripal_pub.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_pub_node_update in legacy/tripal_pub/includes/tripal_pub.chado_node.inc: Implements hook_node_update(). Acts on all content types.
tripal_pub_relationships.tpl.php in legacy/tripal_pub/theme/templates/tripal_pub_relationships.tpl.php
tripal_pub_teaser.tpl.php in legacy/tripal_pub/theme/templates/tripal_pub_teaser.tpl.php
tripal_stock_nd_genotypes.tpl.php in legacy/tripal_natural_diversity/theme/templates/tripal_stock_nd_genotypes.tpl.php
tripal_stock_nd_phenotypes.tpl.php in legacy/tripal_natural_diversity/theme/templates/tripal_stock_nd_phenotypes.tpl.php
tripal_stock_node_insert in legacy/tripal_stock/includes/tripal_stock.chado_node.inc: Implements hook_node_insert(). Acts on all content types.
tripal_stock_publications.tpl.php in legacy/tripal_stock/theme/templates/tripal_stock_publications.tpl.php