Tripal Drush Integration
- 2.x tripal_core/tripal_core.drush.inc tripal_drush
- 3.x tripal_chado/tripal_chado.drush.inc tripal_drush
Contains function relating to drush-integration of various tripal modules.
File
- tripal_chado/
tripal_chado.drush.inc, line 7 - Contains function relating to drush-integration of this module.
Functions
Name |
Location | Description |
|---|---|---|
| drush_tripal_chado_set_user |
tripal_chado/ |
Set the user to run a drush job. |
| drush_tripal_chado_trp_clean_nodes |
legacy/ |
Clean-up orphaned Drupal nodes and chado records. |
| drush_tripal_chado_trp_get_cversion |
tripal_chado/ |
Returns the current version of chado. |
| drush_tripal_chado_trp_get_table |
tripal_chado/ |
Returns the Tripal Schema API Description of the given table |
| drush_tripal_chado_trp_import_pubs |
tripal_chado/ |
Imports publications into Chado |
| drush_tripal_chado_trp_refresh_mview |
tripal_chado/ |
Updates the specified materialized view |
| drush_tripal_chado_trp_update_pubs |
tripal_chado/ |
Imports publications into Chado |
| drush_tripal_core_set_user |
legacy/ |
Set the user to run a drush job. |
| drush_tripal_core_tripal_chadotable_desc |
legacy/ |
DEPRECATED. Returns the Tripal Schema API Description of the given table. |
| drush_tripal_core_tripal_chado_version |
legacy/ |
DEPRECATED. Returns the current version of chado. |
| drush_tripal_core_tripal_jobs_current |
legacy/ |
DEPRECATED. Prints details about the current running job. |
| drush_tripal_core_tripal_jobs_launch |
legacy/ |
DEPRECATED. Executes jobs in the Tripal Jobs Queue. |
| drush_tripal_core_tripal_jobs_rerun |
legacy/ |
DEPRECATED. Executes jobs in the Tripal Jobs Queue. |
| drush_tripal_core_tripal_node_clean |
legacy/ |
DEPRECATED. Clean-up orphaned Drupal nodes and chado records. |
| drush_tripal_core_tripal_update_mview |
legacy/ |
DEPRECATED. Updates the specified materialized view. |
| drush_tripal_core_trp_clean_nodes |
legacy/ |
Clean-up orphaned Drupal nodes and chado records. |
| drush_tripal_feature_sync |
legacy/ |
Sync Chado Features with Drupal (ie: create nodes) |
| drush_tripal_feature_tripal_get_sequence |
legacy/ |
Retrieves the sequence of the indicated features |
| drush_tripal_phylogeny_trp_delete_phylotree |
legacy/ |
Deletes a phylotree record. |
| drush_tripal_phylogeny_trp_insert_phylotree |
legacy/ |
Deletes a phylotree record. |
| drush_tripal_pub_tripal_pubs_import |
legacy/ |
DEPRECATED. Imports publications into Chado |
| drush_tripal_pub_tripal_pubs_update |
legacy/ |
DEPRECATED. Imports publications into Chado |
| drush_tripal_set_user |
tripal/ |
Set the user to run a drush job. |
| drush_tripal_trp_get_currjob |
tripal/ |
Prints details about the current running job. |
| drush_tripal_trp_prepare_chado |
tripal/ |
Prepares content types on the site after chado installation. |
| drush_tripal_trp_rerun_job |
tripal/ |
Executes jobs in the Tripal Jobs Queue. |
| drush_tripal_trp_run_jobs |
tripal/ |
Executes jobs in the Tripal Jobs Queue. |
| drush_tripal_trp_run_jobs_install |
tripal/ |
Executes jobs in the Tripal Jobs Queue. |
| drush_tripal_trp_set_permissions |
tripal/ |
Sets permissions for the content types on the site. |
| tripal_chado_drush_command |
tripal_chado/ |
Registers a drush command and constructs the full help for that command. |
| tripal_chado_drush_help |
tripal_chado/ |
Describes each drush command implemented by the module |
| tripal_core_drush_command |
legacy/ |
Registers a drush command and constructs the full help for that command. |
| tripal_core_drush_help |
legacy/ |
Describes each drush command implemented by the module |
| tripal_drush_command |
tripal/ |
Registers a drush command and constructs the full help for that command. |
| tripal_drush_help |
tripal/ |
Describes each drush command implemented by the module |
| tripal_feature_drush_command |
legacy/ |
Registers a drush command and constructs the full help for that command |
| tripal_feature_drush_help |
legacy/ |
Describes each drush command implemented by the module |
| tripal_phylogeny_drush_command |
legacy/ |
Registers a drush command and constructs the full help for that command |
| tripal_phylogeny_drush_help |
legacy/ |
Describes each drush command implemented by the module |
| tripal_pub_drush_command |
legacy/ |
Registers a drush command and constructs the full help for that command |
| tripal_pub_drush_help |
legacy/ |
Describes each drush command implemented by the module |