Installs Chado v1.3.

File

tripal_core/includes/tripal_core.chado_install.inc, line 249

Functions to install chado schema through Drupal

Code

function tripal_core_install_chado_1_3() {
  // Get the path to the schema and init SQL files.
  $schema_file = drupal_get_path('module', 'tripal_core') .
    '/chado_schema/default_schema-1.3.sql';
  $init_file = drupal_get_path('module', 'tripal_core') .
    '/chado_schema/initialize-1.3.sql';

  // Erase the Chado schema if it exists and perform the install.
  if (tripal_core_reset_chado_schema()) {
    $success = tripal_core_install_sql($schema_file);
    if ($success) {
      print "Install of Chado v1.3 (Step 1 of 2) Successful!\n";
    }
    else {
      throw new Exception("Installation (Step 1 of 2) Problems!  Please check output above for errors.");
    }
    $success = tripal_core_install_sql($init_file);
    if ($success) {
      print "Install of Chado v1.3 (Step 2 of 2) Successful.\nInstallation Complete\n";
    }
    else {
      throw new Exception("Installation (Step 2 of 2) Problems!  Please check output above for errors.");
    }
  }
  else {
    throw new Exception("ERROR: cannot install chado.  Please check database permissions");
  }
}