Database Reference Module

  1. 2.x tripal_db/tripal_db.module tripal_db
  2. 1.x tripal_db/tripal_db.module tripal_db

Provides functions for managing chado database references which link chado content, such as features and stocks, to records/pages in external databases/websites. For example, you might have a feature record in your site which is also in the NCBI website and by adding a database refrence to your feature, an automatic link to the content at NCBI is created.

File

tripal_db/tripal_db.module, line 12
General functions for the db module

Functions

Namesort descending Location Description
tripal_db_add_db_form_fields tripal_db/includes/tripal_db.admin.inc Fields commmon between the add/edit forms
tripal_db_admin_db_listing tripal_db/includes/tripal_db.admin.inc Launchpad for database reference administration
tripal_db_db_add_form tripal_db/includes/tripal_db.admin.inc Form to add new databases. Implements hook_form().
tripal_db_db_add_form_submit tripal_db/includes/tripal_db.admin.inc Submit for add db form
tripal_db_db_add_form_validate tripal_db/includes/tripal_db.admin.inc Validation fucntion for tripal_db_db_add_form
tripal_db_db_edit_form tripal_db/includes/tripal_db.admin.inc Form to edit existing databases. Implements hook_form().
tripal_db_db_edit_form_submit tripal_db/includes/tripal_db.admin.inc Submit for edit db form
tripal_db_db_edit_form_validate tripal_db/includes/tripal_db.admin.inc Validation fucntion for tripal_db_db_edit_form
tripal_db_defaultview_admin_dbxref_listing tripal_db/tripal_db.views_default.inc Default Admin View for dbxref management
tripal_db_defaultview_admin_db_listing tripal_db/tripal_db.views_default.inc Default Admin View for db management
tripal_db_disable tripal_db/tripal_db.install Implements hook_disable(). Disable default views when module is disabled
tripal_db_edit_form_ajax tripal_db/includes/tripal_db.admin.inc Ajax callback for the tripal_db_form
tripal_db_form_fields_validate tripal_db/includes/tripal_db.admin.inc Generic form validation for shared fields of both the edit and add forms
tripal_db_install tripal_db/tripal_db.install Implementation of hook_install().
tripal_db_menu tripal_db/tripal_db.module Implements hook_menu().
tripal_db_permission tripal_db/tripal_db.module Implements hook_permission().
tripal_db_requirements tripal_db/tripal_db.install Implementation of hook_requirements().
tripal_db_theme tripal_db/tripal_db.module Implements hook_theme().
tripal_db_uninstall tripal_db/tripal_db.install Implementation of hook_uninstall().
tripal_db_views_api tripal_db/tripal_db.module Implements hook_views_api().
tripal_db_views_default_views tripal_db/tripal_db.views_default.inc Implements hook_views_default_views().