tripal_phylogeny_analysis.tpl.php
- 2.x tripal_phylogeny/theme/templates/tripal_phylogeny_analysis.tpl.php
- 3.x legacy/tripal_phylogeny/theme/templates/tripal_phylogeny_analysis.tpl.php
1 theme call to tripal_phylogeny_analysis.tpl.php
- tripal_phylogeny_node_view in tripal_phylogeny/
includes/ tripal_phylogeny.chado_node.inc - Implements hook_node_view(). Acts on all content types
File
tripal_phylogeny/theme/templates/tripal_phylogeny_analysis.tpl.phpView source
- <?php
- $node = $variables['node'];
- $phylotree = $node->phylotree;
-
- if ($phylotree->analysis_id) {
-
- // the $headers array is an array of fields to use as the colum headers.
- // additional documentation can be found here
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $header = array(
- 'Name',
- 'Description',
- array(
- 'data' => 'Metadata',
- 'width' => '50%',
- ),
- );
-
- // the $rows array contains an array of rows where each row is an array
- // of values for each column of the table in that row. Additional documentation
- // can be found here:
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $rows = array();
-
- $analysis = $phylotree->analysis_id;
- if ($analysis) {
- $analysis = chado_expand_var($analysis, 'field', 'analysis.description');
- // Source row
- $source = '';
- if($analysis->sourceuri){
- $source = "<a href=\"$analysis->sourceuri\">$analysis->sourcename</a>";
- }
- else {
- $source = $analysis->sourcename;
- }
- if($analysis->sourceversion){
- $source = " (" . $analysis->sourceversion . ")";
- }
-
- $software = $analysis->program;
- if($analysis->programversion != 'n/a'){
- $software .= " (" . $analysis->programversion . ")";
- }
- if($analysis->algorithm){
- $software .= ". " . $analysis->algorithm;
- }
- $date = preg_replace("/^(\d+-\d+-\d+) .*/","$1", $analysis->timeexecuted);
- $metadata = "
- <dl class=\"tripal-dl\">
- <dt>Method</dt> <dd>: $software</dd>
- <dt>Source</dt> <dd>: $source</dd>
- <dt>Date</dt> <dd>: $date</dd>
- </dl>
- ";
-
- $analysis_name = $analysis->name;
- if (property_exists($analysis, 'nid')) {
- $analysis_name = l($analysis_name, "node/" . $analysis->nid);
- }
- $rows[] = array($analysis_name, $analysis->description, $metadata);
- }
-
- // the $table array contains the headers and rows array as well as other
- // options for controlling the display of the table. Additional
- // documentation can be found here:
- // https://api.drupal.org/api/drupal/includes%21theme.inc/function/theme_table/7
- $table = array(
- 'header' => $header,
- 'rows' => $rows,
- 'attributes' => array(
- 'id' => 'tripal_phylogeny-table-analysis',
- 'class' => 'tripal-data-table'
- ),
- 'sticky' => FALSE,
- 'caption' => '',
- 'colgroups' => array(),
- 'empty' => t('This tree is not associated with an analysis'),
- );
- print theme_table($table);
- }