tripal_bulk_loader.api.templates.inc
- 2.x tripal_bulk_loader/api/tripal_bulk_loader.api.templates.inc
- 3.x tripal_bulk_loader/api/tripal_bulk_loader.api.templates.inc
- 1.x tripal_bulk_loader/api/tripal_bulk_loader.api.templates.inc
Provides functions for hooking into bulk loader functionality.
File
tripal_bulk_loader/api/tripal_bulk_loader.api.templates.incView source
- <?php
- /**
- * @file
- * Provides functions for hooking into bulk loader functionality.
- *
- * @ingroup tripal_bulk_loader
- */
-
- /**
- * @defgroup tripal_bulk_loader_api Tripal Bulk Loader Module API
- * @ingroup tripal_api
- * @{
- * All functions in this file provide an API to administrative management of bulk loader templates
- * @}
- */
-
- /**
- * Validates an $options array for insert or update of a bulk loader record.
- *
- * @param $val_type
- * The type of validation. Can be either 'insert' or 'update'.
- * @param $options
- * An array of key/value pairs containing the following keys:
- * 'template_name': The name of the template.
- * 'template_array': The JSON array representing the template.
- * Optional:
- * 'strict': If set then only JSON formatted templates are allowed.
- * @param $errors
- * An empty array where validation error messages will be set. The keys
- * of the array will be name of the field from the options array and the
- * value is the error message.
- * @param $warnings
- * An empty array where validation warning messagges will be set. The
- * warnings should not stop an insert or an update but should be provided
- * to the user as information by a drupal_set_message() if appropriate. The
- * keys of the array will be name of the field from the options array and the
- * value is the error message.
- *
- * @return
- * If validation failes then FALSE is returned. Any options that do not pass
- * validation checks will be added in the $errors array with the key being
- * the option and the value being the error message. If validation
- * is successful then TRUE is returned.
- *
- */
- function tripal_validate_bulk_loader_template($val_type, &$options, &$errors, &$warnings = array()) {
- $template_array = trim($options['template_array']);
- $template_name = trim($options['template_name']);
- $strict = array_key_exists('strict', $options) ? $options['strict'] : FALSE;
-
- // Make sure the template array is one of the supported types
- // DEPRECATED: A stringified version of the array (causes security issues)
- if (preg_match('/^array/', $template_array)) {
- if ($strict) {
- $errors['template_array'] = t('Invalid template array. Please provide
- a JSON formatted array');
- return FALSE;
- }
- else {
- $warnings['template_array'] = t('Please note that import of
- bulk loader templates as PHP arrays as a stringified array is deprecated
- and will be removed in future versions of Tripal. Export and import
- format will be JSON.');
- }
- }
- // DEPRECATED: A serialized PHP array
- elseif (preg_match('/^a:/', $template_array)) {
- if ($strict) {
- $errors['template_array'] = t('Invalid template array. Please provide
- a JSON formatted array');
- return FALSE;
- }
- else {
- $warnings['template_array'] = t('Please note that import of
- bulk loader templates as PHP serialized arrays is deprecated and will
- be removed in future versions of Tripal. Export and import format will
- be JSON.');
- }
- }
- // JSON FORMAT
- elseif (json_decode($template_array)) {
- // This is correct!
- }
- else {
- $errors['template_array'] = t('The template array must be in
- JSON format (although PHP strigified arrays and PHP serialized
- arrays are temporarily supported for backwards compatibility).');
- return FALSE;
- }
-
- // Make sure the template name is unique
- $name_exists = db_select('tripal_bulk_loader_template', 'tblt')
- ->fields('tblt', array('template_id'))
- ->condition('name', $template_name)
- ->execute()
- ->fetchField();
- if ($name_exists) {
- $errors['template_name'] = t('The template name already exists. Please
- choose another name.');
- return FALSE;
- }
- return TRUE;
- }
-
- /**
- * Inserts a bulk loader template record.
- *
- * This function validates the options passed prior to insertion of the record,
- *
- * @param $options
- * An array of key/value pairs containing the following keys:
- * 'template_name': The name of the template.
- * 'template_array': The JSON array representing the template.
- * Optional:
- * 'strict': If set then only JSON formatted templates are allowed.
- * @param $errors
- * An empty array where validation error messages will be set. The keys
- * of the array will be name of the field from the options array and the
- * value is the error message.
- * @param $warnings
- * An empty array where validation warning messagges will be set. The
- * warnings should not stop an insert or an update but should be provided
- * to the user as information by a drupal_set_message() if appropriate. The
- * keys of the array will be name of the field from the options array and the
- * value is the error message.
- * @return
- * TRUE for success and FALSE for failure.
- */
- function tripal_insert_bulk_loader_template($options, &$errors, &$warnings) {
-
- $success = tripal_validate_bulk_loader_template('insert', $options, $errors, $warnings);
- if (!$success) {
- foreach ($errors as $field => $message) {
- tripal_report_error('tripal_bulkldr', TRIPAL_ERROR, $message);
- }
- return FALSE;
- }
-
- // Insert the bulk loader template.
- $template_array = trim($options['template_array']);
- $template_name = trim($options['template_name']);
-
- // Previous version of Tripal would export the template as a PHP array.
- // This has security implications and is deprecated. This support should
- // be reomved in future versions of Tripal, but to support transfers of
- // templates between v1.1 and v2.x sites we support it.
- if (preg_match('/^array/', $template_array)) {
- $tarray = array();
- eval("\$tarray = $template_array;");
- $template_array = serialize($tarray);
- }
- // For a brief period, the bulk loader templates were exported as a PHP
- // serialized array. We have moved to exporting in JSON as JSON is more
- // user friendly. But we must support the serialized PHP array for
- // backwards compatibility of v2.0-rc1 sites and v2.x sites.
- elseif (preg_match('/^a:/', $template_array)) {
- // do nothing it's in PHP serialized format
- }
- // The typical format is JSON
- elseif (json_decode($template_array)) {
- $template_array = serialize(json_decode($template_array, TRUE));
- }
- else {
- $errors['template_array'] = t('Unrecognized array type.');
- return FALSE;
- }
-
- $record = array(
- 'name' => $template_name,
- 'template_array' => $template_array,
- 'created' => time(),
- 'changed' => time()
- );
- if (!drupal_write_record('tripal_bulk_loader_template', $record)) {
- return FALSE;
- }
- return TRUE;
- }
-
- /**
- * Meant to be called from a form_validate function to ensure a newly added bulk loader record
- * name is unique and not empty.
- *
- * @param $new_record_name
- * The record name to check for uniqueness
- * @param $template_id
- * The template_id of the template to add the record to
- * @param $template_array
- * The array describing the template. Optional -will be loaded using template_id if not provided
- * @param $current_priority
- * The priority of the already existing record -checks that the name only occurs on this particular record
- *
- * @return
- * TRUE if the record name is not empty and not already in the template_array; FALSE otherwise
- *
- * @ingroup tripal_bulk_loader_api
- */
- function tripal_is_bulk_loader_record_name_unique($new_record_name, $template_id, $template_array = NULL, $current_priority = NULL) {
-
- // get the template array if it's not supplied
- if (empty($template_array)) {
- $template = db_query("SELECT * FROM {tripal_bulk_loader_template} WHERE template_id=:template", array(':template' => $template_id))->fetchObject();
- $template_array = unserialize($template->template_array);
- if (!is_array($template_array)) {
- return TRUE;
- }
- }
-
- // Check that the new record name is not empty
- if (empty($new_record_name)) {
- return FALSE;
- }
-
- // Check the new record name is unique
- foreach ($template_array as $priority => $t) {
- if (strcmp($t['record_id'], $new_record_name) == 0) {
- if (($priority != $current_priority) AND ($current_priority !== NULL)) {
- return FALSE;
- }
- }
- }
- return TRUE;
- }
-
- /**
- * An API function to delete a record from a template array
- *
- * @param $delete_priority
- * The priority of the record to be deleted
- * @param $template_array
- * The array describing the template
- *
- * @return
- * The modified template array
- *
- * @ingroup tripal_bulk_loader_api
- */
- function tripal_delete_bulk_loader_record($delete_priority, $template_array) {
-
- if (empty($template_array)) {
- drupal_set_message("Unable to delete record with a priority of $priority since the template was not supplied",'error');
- return FALSE;
- }
-
- $new_template_array = array();
- $i=0;
- foreach ($template_array as $priority => $record) {
- if ($priority != $delete_priority) {
- $new_template_array[$i] = $record;
- $i++;
- }
- }
-
- return $new_template_array;
- }
-
- /**
- * An API function to delete a field from a template array
- *
- * @param $priority
- * The priority of the record containing the field
- * @param $delete_field_index
- * The index of the field to be deleted
- * @param $template_array
- * The array describing the template
- *
- * @return
- * The modified template array
- *
- * @ingroup tripal_bulk_loader_api
- */
- function tripal_delete_bulk_loader_field($priority, $delete_field_index, $template_array) {
-
- if (empty($template_array)) {
- drupal_set_message("Unable to delete record with a priority of $priority since the template was not supplied",'error');
- return FALSE;
- }
-
- // Re-order the remaining fields of the same record to ensure that the indicies are
- // 0 to size and. If this is not done, weird behaviour may result
- $new_template_array = $template_array;
- $new_template_array[$priority]['fields'] = array();
- $i=0;
- foreach ($template_array[$priority]['fields'] as $field_index => $field_details) {
- if ($field_index != $delete_field_index) {
- $new_template_array[$priority]['fields'][$i] = $field_details;
- $i++;
- }
- }
-
- // If this field was the only one in the current record, also delete the record
- if (empty($new_template_array[$priority]['fields'])) {
- $new_template_array = tripal_delete_bulk_loader_record($priority, $new_template_array);
- }
-
- return $new_template_array;
- }