tripal_bulk_loader.drush.inc
- 2.x tripal_bulk_loader/tripal_bulk_loader.drush.inc
- 3.x tripal_bulk_loader/tripal_bulk_loader.drush.inc
- 1.x tripal_bulk_loader/tripal_bulk_loader.drush.inc
Implements drush integration for this module
File
tripal_bulk_loader/tripal_bulk_loader.drush.incView source
- <?php
-
- /**
- * @file
- * Implements drush integration for this module
- */
-
- /**
- * Implements hook_drush_command().
- */
- function tripal_bulk_loader_drush_command() {
- $items = array();
- $items['tripal-loader-progress'] = array(
- 'description' => dt('Display the progress of any running tripal bulk loading job.'),
- 'aliases' => array('trpload-%'),
- );
- $items['tripal-loader-view'] = array(
- // used by drush help
- 'description' => dt('Returns the status/details of the specified bulk loading job.'),
- 'arguments' => array(
- 'nid' => dt('The Node ID of the bulk Loading Job')
- ),
- 'examples' => array(
- 'Standard Example' => 'drush tripal-loader-view 5433',
- ),
- 'aliases' => array('trpload-view')
- );
- $items['tripal-loader-cancel'] = array(
- // used by drush help
- 'description' => dt('Cancels the specified bulk loading job.'),
- 'arguments' => array(
- 'nid' => dt('The Node ID of the bulk Loading Job')
- ),
- 'examples' => array(
- 'Standard Example' => 'drush tripal-loader-cancel 5433',
- ),
- 'aliases' => array('trpload-cncl')
- );
- $items['tripal-loader-submit'] = array(
- // used by drush help
- 'description' => dt('Submit or Re-submit the given bulk loading job.'),
- 'arguments' => array(
- 'nid' => dt('The Node ID of the bulk Loading Job')
- ),
- 'examples' => array(
- 'Standard Example' => 'drush tripal-loader-submit 5433',
- ),
- 'aliases' => array('trpload-sbmt')
- );
- $items['tripal-loader-revert'] = array(
- // used by drush help
- 'description' => dt('Revert the records loaded by the last run of the specified loading job. This is only available if the specified loading job is keeping track of inserted IDs.'),
- 'arguments' => array(
- 'nid' => dt('The Node ID of the bulk Loading Job')
- ),
- 'examples' => array(
- 'Standard Example' => 'drush tripal-loader-revert 5433',
- ),
- 'aliases' => array('trpload-revert')
- );
-
- return $items;
- }
-
- /**
- * Code ran for the tripal-loader-progress drush command
- * Display the progress of any running tripal bulk loading job.
- */
- function drush_tripal_bulk_loader_tripal_loader_progress() {
-
- // determine the progress of any loading jobs
- $sql = "SELECT t.loader_name, t.file, t.job_id FROM {tripal_bulk_loader} t WHERE job_status='Loading...'";
- $resource = db_query($sql);
-
- while ($r = db_fetch_object($resource)) {
- if ($r->job_id) {
- $progress = tripal_bulk_loader_progess_file_get_progress($r->job_id);
- if ($progress->num_records > 0 AND $progress->total_percent < 100) {
- drush_print(
- $r->loader_name . "\n"
- . str_repeat("-", 40) . "\n"
- . "File:" . $r->file . "\n"
- . "Current Constant Set:\n"
- . "\tLines processed: " . $progress->num_lines . "\n"
- . "\tRecord Inserted: " . $progress->num_records . "\n"
- . "\tPercent Complete: " . $progress->percent_file . "\n"
- . "Number of Constant Sets fully loaded: " . $progress->num_constant_sets_loaded . "\n"
- . "Job Percent Complete: " . $progress->total_percent . "\n"
- );
- }
- }
- }
- }
-
- /**
- * Returns the status/details of the specified bulk loading job.
- *
- * @param $nid
- * The Node ID of the bulk Loading Job
- */
- function drush_tripal_bulk_loader_tripal_loader_view ($nid) {
- $node = node_load($nid);
- $author = user_load($node->uid);
-
- drush_print("Job Name: ".$node->loader_name);
- drush_print("Submitted By: ".$author->name);
- drush_print("Job Creation Date: ".format_date($node->created));
- drush_print("Last Updated: ".format_date($node->changed));
- drush_print("Template Name: ".$node->template->name);
- drush_print("Data File: ".$node->file);
- drush_print("Job Status: ".$node->job_status);
- }
-
- /**
- * Cancels the specified bulk loading job.
- *
- * @param $nid
- * The Node ID of the bulk Loading Job
- */
- function drush_tripal_bulk_loader_tripal_loader_cancel ($nid) {
- $node = node_load($nid);
- db_query("UPDATE {tripal_bulk_loader} SET job_status='%s' WHERE nid=%d", 'Job Cancelled', $node->nid);
- tripal_jobs_cancel($node->job_id,FALSE);
- }
-
- /**
- * Submit or Re-submit the given bulk loading job.
- *
- * @param $nid
- * The Node ID of the bulk Loading Job
- */
- function drush_tripal_bulk_loader_tripal_loader_submit ($nid) {
- global $user;
-
- if ($node->job_id) {
- //Re-submit Tripal Job
- tripal_jobs_rerun($node->job_id);
- db_query("UPDATE {tripal_bulk_loader} SET job_status='%s' WHERE nid=%d", 'Submitted to Queue', $nid);
- }
- else {
- //Submit Tripal Job
- $node= node_load($nid);
- $job_args[1] = $nid;
- if (is_readable($node->file)) {
- $fname = basename($node->file);
- $job_id = tripal_add_job("Bulk Loading Job: $fname", 'tripal_bulk_loader', 'tripal_bulk_loader_load_data', $job_args, $user->uid);
-
- // add job_id to bulk_loader node
- $success = db_query("UPDATE {tripal_bulk_loader} SET job_id=%d WHERE nid=%d", $job_id, $nid);
-
- // change status
- db_query("UPDATE {tripal_bulk_loader} SET job_status='%s' WHERE nid=%d", 'Submitted to Queue', $nid);
- }
- else {
- drupal_set_message(t("Can not open %file. Job not scheduled.", array('%file' => $node->file)));
- }
- }
-
- }
-
- /**
- * Revert the records loaded by the last run of the specified loading job. This is only
- * available if the specified loading job is keeping track of inserted IDs.
- *
- * @param $nid
- * The Node ID of the bulk Loading Job
- */
- function drush_tripal_bulk_loader_tripal_loader_revert ($nid) {
-
- // Remove the records from the database that were already inserted
- $resource = db_query('SELECT * FROM {tripal_bulk_loader_inserted} WHERE nid=%d ORDER BY tripal_bulk_loader_inserted_id DESC', $nid);
- while ($r = db_fetch_object($resource)) {
- $ids = preg_split('/,/', $r->ids_inserted);
- db_query('DELETE FROM {%s} WHERE %s IN (%s)', $r->table_inserted_into, $r->table_primary_key, $r->ids_inserted);
- $result = db_fetch_object(db_query('SELECT true as present FROM {%s} WHERE %s IN (%s)', $r->table_inserted_into, $r->table_primary_key, $r->ids_inserted));
- if (!$result->present) {
- drush_print('Successfully Removed data Inserted into the '.$r->table_inserted_into.' table.');
- db_query('DELETE FROM {tripal_bulk_loader_inserted} WHERE tripal_bulk_loader_inserted_id=%d', $r->tripal_bulk_loader_inserted_id);
- }
- else {
- drush_print('Unable to remove data Inserted into the '.$r->table_inserted_into.' table!');
- }
- }
-
- // reset status
- db_query("UPDATE {tripal_bulk_loader} SET job_status='%s' WHERE nid=%d", 'Reverted -Data Deleted', $nid);
-
- }