Overrides TripalFieldFormatter::view

See also

TripalFieldFormatter::view()

File

tripal_chado/includes/TripalFields/so__transcript/so__transcript_formatter.inc, line 14

Class

so__transcript_formatter

Code

public function view(&$element, $entity_type, $entity, $langcode, $items, $display) {

  // Get the settings
  $settings = $display['settings'];

  $headers = array('Transcript Name', 'Identifier', 'Type', 'Location');
  $rows = array();
  foreach ($items as $delta => $item) {

    if (!$item['value']) {
      continue;
    }
    $transcript = $item['value'];

    // Get the field values
    $feature_name = $transcript['schema:name'];
    $feature_uname = $transcript['data:0842'];
    $loc = $transcript['SO:0000735'];
    $type = $transcript['rdfs:type'];

    // Add a link i there is an entity.
    if (array_key_exists('entity', $item['value']) and $item['value']['entity']) {
      list($entity_type, $entity_id) = explode(':', $item['value']['entity']);
      $feature_name = l($feature_name, "bio_data/" . $entity_id, array('attributes' => array('target' => "_blank")));
    }
    $rows[] = array($feature_name, $feature_uname, $type, $loc);
  }
  $table = array(
    'header' => $headers,
    'rows' => $rows,
    'attributes' => array(
      'id' => 'tripal_feature-table-transcripts-object',
      'class' => 'tripal-data-table'
    ),
    'sticky' => FALSE,
    'caption' => "",
    'colgroups' => array(),
    'empty' => 'This feature has no transcripts',
  );
  $content = theme_table($table);

  // once we have our table array structure defined, we call Drupal's theme_table()
  // function to generate the table.
  if (count($items) > 0) {
    $element[0] = array(
      '#type' => 'markup',
      '#markup' => $content,
    );
  }
}