function tripal_pub_get_pubs_by_dbxref

2.x tripal_pub.DEPRECATED.inc tripal_pub_get_pubs_by_dbxref($pub_dbxref)
3.x tripal_pub.DEPRECATED.inc tripal_pub_get_pubs_by_dbxref($pub_dbxref)
1.x tripal_pub.api.inc tripal_pub_get_pubs_by_dbxref($pub_dbxref)

Deprecated

Restructured API to make naming more readable and consistent. Function was deprecated in Tripal 2.0 and will be removed 2 releases from now. This function has been replaced by chado_get_publication().

See also

chado_get_publication().

File

tripal_pub/api/tripal_pub.DEPRECATED.inc, line 261
Wrapper functions to provide backwards compatibility for the tripal analysis api

Code

function tripal_pub_get_pubs_by_dbxref($pub_dbxref) {

  tripal_report_error(
  'tripal_deprecated', 
  TRIPAL_NOTICE, 
  "DEPRECATED: %old_function has been replaced with %new_function. Please update your code.", 
  array(
    '%old_function' => 'tripal_pub_get_pubs_by_dbxref',
    '%new_function' => 'chado_get_publication'
  )
  );

  $pub = chado_get_publication(array('dbxref' => $pub_dbxref));
  if ($pub) {
    // the original function returned an array of pub_ids
    return array($pub->pub_id);
  }
  else {
    return array();
  }

}