function tripal_feature_seq_extract_form_validate
2.x tripal_feature.seq_extract.inc | tripal_feature_seq_extract_form_validate($form, &$form_state) |
1.x seq_extract.inc | tripal_feature_seq_extract_form_validate($form, &$form_state) |
Validate the extract sequence form
Related topics
File
- tripal_feature/
includes/ tripal_feature.seq_extract.inc, line 435 - Interface for downloading feature sequences
Code
function tripal_feature_seq_extract_form_validate($form, &$form_state) {
$genus = $form_state['values']['genus'];
$species = $form_state['values']['species'];
$analysis = $form_state['values']['analysis'];
$ftype = $form_state['values']['ftype'];
$fnames = $form_state['values']['fnames'];
$upstream = $form_state['values']['upstream'];
$downstream = $form_state['values']['downstream'];
$use_parent = $form_state['values']['use_parent'];
$aggregate = $form_state['values']['aggregate'];
$agg_types = $form_state['values']['agg_types'];
if ($upstream and !preg_match('/^\d+$/', $upstream)) {
form_set_error('upstream', 'Please enter a positive numeric value for the upstream bases');
}
if ($downstream and !preg_match('/^\d+$/', $downstream)) {
form_set_error('downstream', 'Please enter a positive numeric value for the downstream bases');
}
if (!$genus and !$species and !$ftype and !$fnames) {
form_set_error('', 'Please provide a feature name, a feature type or a genus.');
}
if ($ftype == 'polypeptide' and $upstream) {
form_set_error('upstream', 'When the sequence type is protein the upstream value must be unset.');
}
if ($ftype == 'polypeptide' and $downstream) {
form_set_error('downstream', 'When the sequence type is protein the downstream value must be unset.');
}
if ($ftype == 'polypeptide' and $use_parent) {
form_set_error('use_parent', 'When the sequence type is protein the "Use Parent" option must not be set.');
}
}